Initial commit

Makefile

@@ -0,0 +1,98 @@
+# The compiler
+CC=mpicxx
+
+# Flags
+CFLAGS=-Wall -larmadillo -std=c++11 -O3 -fopenmp
+PROFFLAGS=-fno-inline-functions
+DBGFLAGS=-DDBG -g
+
+MKDIR=mkdir -p
+RMDIR=rm -rf
+INSTRUMENT=scorep
+
+# Directories for binaries
+BINDIR=./bin
+PROFDIR=./prof
+DEBUGDIR=./debug
+
+# Directories for object files
+BUILDDIR=./build
+BINOBJDIR=$(BUILDDIR)/objs
+PROFOBJDIR=$(BUILDDIR)/prof
+DEBUGOBJDIR=$(BUILDDIR)/debug
+
+# Directory for latex source
+LATEXDIR=./latex
+
+# Source directories
+SRC=./src
+INCLUDE=./include
+
+# Source files and object file locations
+SRCFILES=utils.cpp testlib.cpp data_type.cpp IsingModel.cpp monte_carlo.cpp
+SRCS=$(addprefix $(SRC)/, $(SRCS))
+BINOBJS=$(addprefix $(BINOBJDIR)/, $(SRCFILES:.cpp=.o))
+PROFOBJS=$(addprefix $(PROFOBJDIR)/, $(SRCFILES:.cpp=.o))
+DEBUGOBJS=$(addprefix $(DEBUGOBJDIR)/, $(SRCFILES:.cpp=.o))
+
+# Location for Binaries
+EXEC=main test_suite phase_transition phase_transition_mpi time pd_estimate mcmc_progression
+BINS=$(addprefix $(BINDIR)/, $(EXEC))
+PROFBINS=$(PROFDIR)/phase_transition_mpi
+DEBUGBINS=$(addprefix $(DEBUGDIR)/, $(EXEC))
+
+# List phony targets
+.PHONY: all profile debug latex clean binclean objclean latexclean 
+
+# "Commands"
+all: $(BINS)
+
+profile: $(PROFBINS)
+
+debug: $(DEBUGBINS)
+
+# build latex file
+latex:
+	$(MAKE) -C $(LATEXDIR)
+
+# Rule for binaries
+$(BINDIR)/%: $(BINOBJDIR)/%.o $(BINOBJS)
+	$(MKDIR) $(BINDIR)
+	$(CC) $^ -o $@ $(CFLAGS) -I$(INCLUDE)
+
+# Rule for profiling binaries
+$(PROFDIR)/%: $(PROFOBJDIR)/%.o $(PROFOBJS)
+	$(MKDIR) $(PROFDIR)
+	$(INSTRUMENT) $(CC) $^ -o $@ $(CFLAGS) $(PROFFLAGS) -I$(INCLUDE)
+
+# Rule for debug binaries
+$(DEBUGDIR)/%: $(DEBUGOBJDIR)/%.o $(DEBUGOBJS)
+	$(MKDIR) $(DEBUGDIR)
+	$(CC) $^ -o $@ $(CFLAGS) $(DBGFLAGS) -I$(INCLUDE)
+
+# Rule for object files
+$(BINOBJDIR)/%.o: $(SRC)/%.cpp
+	$(MKDIR) $(BINOBJDIR)
+	$(CC) -c $^ -o $@ $(CFLAGS) -I$(INCLUDE)
+
+# Rule for instrumented object files
+$(PROFOBJDIR)/%.o: $(SRC)/%.cpp
+	$(MKDIR) $(PROFOBJDIR)
+	$(INSTRUMENT) $(CC) -c $^ -o $@ $(CFLAGS) $(PROFFLAGS) -I$(INCLUDE)
+
+# Rule for debug object files
+$(DEBUGOBJDIR)/%.o: $(SRC)/%.cpp
+	$(MKDIR) $(DEBUGOBJDIR)
+	$(CC) -c $^ -o $@ $(CFLAGS) $(DBGFLAGS) -I$(INCLUDE)
+
+# Cleaning
+clean: objclean binclean latexclean
+
+latexclean:
+	$(MAKE) -C $(LATEXDIR) clean
+
+objclean:
+	$(RMDIR) $(BUILDDIR)
+
+binclean:
+	$(RMDIR) $(BINDIR) $(PROFDIR) $(DEBUGDIR)