Make changes

slurm_scripts/execute.script

@@ -0,0 +1,64 @@
+#!/bin/bash
+
+usage() {
+>&2 cat << EOF
+Usage: $0
+   [ -h | --help ]
+   [ --start-temp input ]
+   [ --end-temp input ] 
+   [ --points input ]
+   [ --samples input ]
+EOF
+exit 1
+}
+
+# Defaults
+start_temp=2.1
+end_temp=2.4
+points_temp=40
+samples=1000000
+array_arg=20
+time_arg="0-00:30:00"
+
+VALID_ARGS=$(getopt -o h --long help,start-temp:,end-temp:,points:,samples:,array:,time: -- "$@")
+if [[ $? -ne 0 ]]; then
+    usage
+fi
+
+eval set -- ${VALID_ARGS}
+while : 
+do
+    case "$1" in
+        -h | --help)
+            usage
+            shift
+            ;;
+        --start-temp)
+            start_temp=$2
+            shift 2
+            ;;
+        --end-temp)
+            end_temp=$2
+            shift 2
+            ;;
+        --points)
+            points=$2
+            shift 2
+            ;;
+        --samples)
+            samples=$2
+            shift 2
+            ;;
+        --array)
+            array_arg=$(echo "${2// /}")
+            shift 2
+            ;;
+        --time)
+            time_arg=$2
+            shift 2
+            ;;
+        --) shift; break ;;
+    esac
+done
+
+sbatch --array=$array_arg --time=$time_arg ./jobs/pt.script $start_temp $end_temp $points_temp $samples