Make changes

include/monte_carlo.hpp

@@ -5,7 +5,7 @@
  *
  *  @version 1.0
  *
- *  @brief Functions for monte carlo simulations.
+ *  @brief Functions for Monte Carlo simulations.
  *
  *  @bug No known bugs
  * */
@@ -17,23 +17,13 @@
 #include "utils.hpp"
 
 #include <functional>
-#include <string>
 #include <omp.h>
+#include <string>
 
-//#define BURN_IN_TIME 12500
+// #define BURN_IN_TIME 12500
 #define BURN_IN_TIME 5000
 
-#pragma omp declare reduction(+: data_t: omp_out += omp_in)
-
-/** @brief Test numerical data with analytical data.
- *
- *  @param tol The tolerance between the analytical and numerical solution.
- *  @param max_cycles The max number of Monte Carlo cycles.
- *
- *  return int
- * */
-int test_2x2_lattice(double tol, int max_cycles);
-
+namespace montecarlo {
 /** @brief Write the expected values for each Monte Carlo cycles to file.
  *
  *  @param T Temperature
@@ -41,8 +31,8 @@ int test_2x2_lattice(double tol, int max_cycles);
  *  @param cycles The amount of Monte Carlo cycles to do
  *  @param filename The file to write to
  * */
-void monte_carlo_progression(double T, int L, int cycles,
-                             const std::string filename);
+void progression(double T, int L, int cycles,
+                                    const std::string filename);
 
 /** @brief Write the expected values for each Monte Carlo cycles to file.
  *
@@ -52,8 +42,8 @@ void monte_carlo_progression(double T, int L, int cycles,
  *  @param value The value to set the elements in the lattice
  *  @param filename The file to write to
  * */
-void monte_carlo_progression(double T, int L, int cycles, int value,
-                             const std::string filename);
+void progression(double T, int L, int cycles, int value,
+                                    const std::string filename);
 
 /** @brief Estimate the probability distribution for the energy.
  *
@@ -62,7 +52,8 @@ void monte_carlo_progression(double T, int L, int cycles, int value,
  *  @param cycles The amount of Monte Carlo cycles to do
  *  @param filename The file to write to
  * */
-void pd_estimate(double T, int L, int cycles, const std::string filename);
+void pd_estimate(double T, int L, int cycles,
+                        const std::string filename);
 
 /** @brief Execute the Metropolis algorithm for a certain amount of Monte
  *  Carlo cycles.
@@ -73,7 +64,7 @@ void pd_estimate(double T, int L, int cycles, const std::string filename);
  *
  *  @return data_t
  * */
-data_t monte_carlo_serial(int L, double T, int cycles);
+data_t mcmc_serial(int L, double T, int cycles, int burn_in_time = BURN_IN_TIME);
 
 /** @brief Execute the Metropolis algorithm for a certain amount of Monte
  *  Carlo cycles in parallel.
@@ -84,7 +75,7 @@ data_t monte_carlo_serial(int L, double T, int cycles);
  *
  *  @return data_t
  * */
-data_t monte_carlo_parallel(int L, double T, int cycles);
+data_t mcmc_parallel(int L, double T, int cycles, int burn_in_time = BURN_IN_TIME);
 
 /** @brief Perform the MCMC algorithm using a range of temperatures.
  *
@@ -95,9 +86,10 @@ data_t monte_carlo_parallel(int L, double T, int cycles);
  *  @param monte_carlo Which Monte Carlo implementation to use
  *  @param outfile The file to write the data to
  * */
-void phase_transition(
-    int L, double start_T, double end_T, int points_T,
-    std::function<data_t(int, double, int)> monte_carlo,
-    std::string outfile);
+void
+phase_transition(int L, double start_T, double end_T, int points_T, int cycles,
+                 std::function<data_t(int, double, int, int)> monte_carlo,
+                 std::string outfile, int burn_in_time = BURN_IN_TIME);
+}; // namespace montecarlo
 
 #endif